Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918792.1_cds_XP_016468163.1_60833
CDS Infomation

[gene=LOC107790719] [db_xref=GeneID:107790719] [protein=vicilin-like seed storage protein At2g28490] [protein_id=XP_016468163.1] [location=join(58592..58907,59133..59317,59428..59508,59597..59992,60414..60896)] [gbkey=CDS]
Sequence

ATGGGAAAGAGAAACAGTCTGCTGCTACTAGTGGTGGTACTTTTCTCTGCACTAGTGGCC
TCTGTTGGTGGGCATTGGAGAGAAAGAGAAGAGGAAGGAAGTGAGCAAAGAACTCAAGGA
GAAAAATGGTTTTTGCTGCGTCACTTACATGATGTAGTGAAAACTGATGCTGGGCTCATG
AGATTGGTGAAAGGCGGATATAGTAGAGGAACATCTTTCCATAGTCCAATGCGTATTGGG
TTCATCTCTATGGAACCAAATAGCCTCTTCATCCCTCAGTACCTTGATTCCAATCTTCTC
CTCTTTGTTCACCATGGGGAAGCAAGAGTTGGACACATCTACGGGGATGTATTAGCAGAA
AGGGGTTTGAAGCCCGGTGATGTGTACACAATTCCTGCTGGATCAGCTTTCTATTTGGAG
AATAGAGTTGAAAACCAGAGACTTCACATTATTTGCAGTATTGATGTTACCTCTGAATCC
ATGGGATGGCATGCCTTCCAGTCTTTCTTCGTTGGTGGTGGAATTTATCCTACATCCATT
CTTGCTGGATTCGACCATACCACATTATCAACTGCTCTTAATGTCTCTACAGCAGAATTA
AGCACGTTCTTGACAAGGCAATCTTCCGGGCCAATCGTGCATTTGTCTGGTTCTCATCAC
ACACACATTTGGTCCAAATTCTTGGCCCAAGAGCCCCACAAGAGACTAGCTCACTTGAAG
AGGATTGCGAATTTTAAGGAAGAAACTATCCCAAAGGAGGAGGAATCAACATGGTCATTG
AGGAAATTTCTATTTACTTTGTTAAACAGGGAAGACGTTGTCGAGAGAGTGAATCATAAA
GCTCCATCAGCGTATAATCTCTACAACAGGAAAGCCGATTTCAAGAACGACTATGGATGG
AGCAAGAAATTGGATGAGTCTAATTATCCTCCTCTAAAGATATCTGGAAATGGCGTTTTT
CTTGTCAATCTATCTCCGGGATCCATGATGGCACCTCATGTTAATCCAACAGCAATAGAG
TATGGAATAGTTTTGAAAGGGACTGGCAGAGTCCAAATTGTGTATCCAAATGGAACTTTA
GCCATGAACGCTAGAGTACGAGAAGGGGACGTTTTTTGGGTGCCGAGGTACTTCCCCTTC
TGCCAAATTGCTTCAACAAATGGCCCGTTTGAGTTCTTTGGCTTCACGACATCAGCAAGG
AGAAACCATCAGCAGTTCTTGGTGGGTAAGAACTCATTGATGCAGAGCTTGAGAGGGCCA
GAATTTGCAGCTGCATTTGGTATAAGTGAGAAAAGGCTTAAGAGGATTGCCAATGCTCAA
AGTGAACAAGTCATCTTGCCATCATCGTCACCGGCTTCTCCTCATCATTACAAGGCAACA
GAGCCAGAGAGGAAGAAGATGGTCAAATTTGAAAAGATGATAGGGAGCTTTGGCAATGAC
CTGATTCTGGGTTTTGATTAG

Peptide Sequence

PEP ID

XP_016468163.1
PEP Infomation

PREDICTED: vicilin-like seed storage protein At2g28490 [Nicotiana tabacum]
Sequence

MGKRNSLLLLVVVLFSALVASVGGHWREREEEGSEQRTQGEKWFLLRHLHDVVKTDAGLM
RLVKGGYSRGTSFHSPMRIGFISMEPNSLFIPQYLDSNLLLFVHHGEARVGHIYGDVLAE
RGLKPGDVYTIPAGSAFYLENRVENQRLHIICSIDVTSESMGWHAFQSFFVGGGIYPTSI
LAGFDHTTLSTALNVSTAELSTFLTRQSSGPIVHLSGSHHTHIWSKFLAQEPHKRLAHLK
RIANFKEETIPKEEESTWSLRKFLFTLLNREDVVERVNHKAPSAYNLYNRKADFKNDYGW
SKKLDESNYPPLKISGNGVFLVNLSPGSMMAPHVNPTAIEYGIVLKGTGRVQIVYPNGTL
AMNARVREGDVFWVPRYFPFCQIASTNGPFEFFGFTTSARRNHQQFLVGKNSLMQSLRGP
EFAAAFGISEKRLKRIANAQSEQVILPSSSPASPHHYKATEPERKKMVKFEKMIGSFGND
LILGFD

Transcript Sequence

Gene sequence data has not been registered.